• Free
  • Edit boxes
  • Export as PNG
Agar plate with bacterial colonies automatically counted by AI

Colony Counter

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AI counts used: 0/3

AI counts can miss colonies. Double check results.

Step 1

Upload a clear plate image

Step 2

Run AI detection

Step 3

Review and fix boxes

Step 4

Export as image

How this web tool fits

Online colony counting

Use the website for fast, no-login colony counting from agar plates, petri dishes, and similar CFU-style images. Upload a plate photo, run AI detection, then correct boxes before recording your final count.

For protocol-integrated workflows (timers, notes, saved projects, and more tools), continue in the Lab Laps mobile app.

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Agar plate with bacterial colonies automatically counted by AI in the colony counter tool

About this colony counter

Use this free online colony counter to estimate CFU counts from an agar plate or petri dish image in seconds. The tool detects bacterial colonies with automated counting so you can review boxes, adjust detections, and keep a clear final count.

How it works

  1. 1Upload a clear agar plate or petri dish photo.
  2. 2Run AI detection to count visible bacterial colonies automatically.
  3. 3Review detections, then copy or download your final result.

Who is this for?

This colony counter is useful for microbiology labs, researchers, food safety testing teams, and students who need quick CFU-style plate estimates. It helps standardize bacterial colony counting from agar plate and petri dish images while keeping manual review in the workflow.

Colony counter FAQ

Is the Lab Laps colony counter free?

Yes. The web colony counter is free and does not require a login, with up to 3 AI counts per visitor. After that, you can continue in the Lab Laps mobile app for more counting.

What kind of images work best?

Use a sharp, top-down photo of an agar plate or petri dish with even lighting and clear contrast between bacterial colonies and the background. Cropping close to the plate usually improves bacteria counting results.

Can I use this for bacteria counting or CFU counting?

Yes. The tool is built for bacterial colony counting and CFU-style plate counts from images. Treat the number as AI-assisted until you have reviewed the colony boxes manually.

Can I fix missed or incorrect detections?

Yes. After counting, you can add, remove, or draw boxes to correct the overlay. Use undo/redo as you review, and toggle boxes on/off to compare against the raw image.

What is confidence?

Confidence is the AI model score for how likely a detected box is a real colony. The confidence slider filters detections so you can choose a stricter or more permissive view before manual review.

Can I export the result?

Yes. Export downloads a PNG of your plate image with the current visible boxes overlaid, which is useful for recordkeeping and sharing a reviewed count.

Can I use the count directly for CFU reporting?

Treat the result as an AI-assisted count, not an unchecked final record. Review the boxes manually, especially for crowded plates, bubbles, glare, merged colonies, or contaminants.

Lab Laps

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